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INTERNATIONAL EDITIONS
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[2]
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Current Trends in Cellular Automata and Automata Networks
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[1]
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Automata Networks and Their Applications
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INTERNATIONAL BOOK CHAPTERS
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[2]
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Boolean networks and their dynamics: the impact of updates
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[1]
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On Boolean automata isolated cycles and tangential double-cycles dynamics
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J. Demongeot, T. Melliti, M. Noual, D. Regnault
S. Sené
Automata and complexity, Springer Series on Emergence,
Complexity, Computation, 42:145-178, Springer, 2022.
lien officiel,
lien preprint,
bibtex
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INTERNATIONAL JOURNALS
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[15]
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On
Representation of gene regulation networks by hypothesis logic based Boolean systems
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[14]
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On
Boolean automata networks
(de)composition
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[13]
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Attractor
landscapes in Boolean networks
with firing memory
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[12]
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About
block-parallel Boolean networks: a
position paper
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[11]
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Phase
transitions in stochastic
non-linear threshold Boolean
automata networks on ZxZ: the
boundary impact
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[10]
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Synchronism
vs asynchronism in monotonic
Boolean automata networks
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[9]
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About
non-monotony in Boolean automata networks
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[8]
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Combinatorics
of Boolean automata circuits dynamics
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[7]
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"Immunetworks",
intersecting circuits and dynamics
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[6]
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Attraction
basins as gauges of the robustness against
boundary conditions in biological complex
systems
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[5]
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Micro-RNAs:
viral genome and robustness of gene
expression in the host
|
J. Demongeot, E. Drouet,
A. Elena, A. Moreira, Y. Rechoum &
S. Sené
Philosophical Transactions
of the Royal Society A, 367:
4941-4965, 2009
official link,
preprint link,
bibtex
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[4]
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Robustness
in regulatory interaction networks. A
generic approach with applications at
different levels: physiologic, metabolic
and genetic
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J. Demongeot, H. Ben
Amor, A. Elena, P. Gillois, M. Noual
& S. Sené
International Journal of
Molecular Sciences, 10(10): 4437-4473,
2009
official link (open access),
bibtex
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[3]
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Boundary
conditions and phase transitions in neural
networks. Theoretical results
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[2]
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Boundary
conditions and phase transitions in neural
networks. Simulation results
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[1]
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Robustness
in regulatory networks: a
multi-disciplinary approach
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INTERNATIONAL COMMUNICATIONS WITH
PROCEEDINGS AND SELECTION COMMITTEE
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[31]
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Dynamical stability of threshold networks over undirected signed graphs
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[30]
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Complexity of Boolean automata networks under block-parallel update modes
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[29]
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Asymptotic (a)synchronism sensitivity and complexity of elementary cellular
automata
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[28]
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Combinatorics of block-parallel automata networks
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[27]
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Turning block-sequential automata networks into
smaller parallel networks with isomorphic limit dynamics
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[26]
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Representation of Boolean genetic regulatory networks by hypothesis logic
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P. Siegel, A. Doncescu, V. Risch & S. Sené
BIOCOMP 2021 Proceedings, Transactions on Computational Science and Computational Intelligence, Springer. To appear.
official
link,
preprint
link,
bibtex
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[25]
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Non-deterministic updates of Boolean networks
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[24]
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Optimising attractor computation in Boolean automata networks
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[23]
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Complexity of limit-cycle
problems in Boolean networks
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[22]
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On
the complexity of acyclic modules
in automata networks
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[21]
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#P-completeness
of counting update digraphs,
cacti, and series-parallel
decomposition method
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[20]
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Towards
a Boolean dynamical system
representation into a nonmonotonic
modal logic
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[19]
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A
framework for (de)composing with
Boolean automata networks
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[18]
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Reconstruction
of Boolean regulatory models of
flower development exploiting an
evolution strategy
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[17]
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On
the cost of simulating a parallel
Boolean automata network by a
block-sequential one
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[16]
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Asynchronous
simulation of Boolean networks by
monotone Boolean networks
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[15]
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On
the flora of asynchronous locally
non-monotonic Boolean automata
networks
|
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[14]
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Asynchronous
dynamics of Boolean automata
double-cycles
|
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[13]
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On
the convergence of Boolean
automata networks without negative
cycles
|
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[12]
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Sensitivity
to synchronism of Boolean automata
networks
|
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[11]
|
Analysis
of modular organisation of
interaction networks based on
asymptotic dynamics
|
F. Delaplace,
H. Klaudel, T. Melliti &
S. Sené
CMSB 2012
Proceedings, LNCS 7605,
148-165, Springer,
2012
Accepted for
presentation at CiE 2012
official link,
preprint link,
bibtex
|
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[10]
|
Boolean
networks synchronism sensitivity
and XOR circulant networks
convergence time
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[9]
|
A
necessary condition for boundary
sensitivity of attractive
non-linear stochastic cellular
automata in ZxZ
|
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[8]
|
The singular
power of the environment on stochastic
nonlinear threshold Boolean automata
networks
|
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[7]
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Random
Boolean networks and attractors of their
intersecting circuits
|
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[6]
|
On the
number of attractors of positive and
negative Boolean automata circuits
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[5]
|
Loss of
linearity and symmetrisation in regulatory
networks
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[4]
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Structural
sensitivity of neural and genetic networks
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[3]
|
Robustness
of dynamical systems attraction basins
against state perturbations: theoretical
protocol and application in systems
biology
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[2]
|
Impact of
fixed boundary conditions on the basins of
attraction in the flower's morphogenesis
of Arabidopsis thaliana
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[1]
|
A
distributed trust diffusion protocol for
ad hoc networks
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NATIONAL EDITIONS
|
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[1]
|
Automates cellulaires et réseaux
d'automates: le rôle central de
l'irrégularité
|
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NATIONAL BOOK CHAPTERS
|
|
[1]
|
Méthodes
informatiques en biologie
|
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NATIONAL JOURNALS
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[2]
|
Les réseaux
d'automates booléens au cœur du calcul
naturel
|
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[1]
|
Cycles,
double-cycles et modes de mise à
jour
|
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NATIONAL COMMUNICATIONS WITH
PROCEEDINGS AND SELECTION COMMITTEE
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[3]
|
Modal hypothesis logic, Boolean dynamical systems and genetic networks
|
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[2]
|
Représentation
des systèmes dynamiques discrets
booléens en logique des
hypothèses
|
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[1]
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Fixed
boundaries influence in biological
networks: from theory to application
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THESES
|
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[3]
|
Sur
la bio-informatique des réseaux
d'automates
|
Habilitation
Thesis, Université
d'Évry - Val d'Essonne,
2012
lien,
bibtex
|
|
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[2]
|
Influence
des conditions de bord dans les réseaux
d'automates booléens à seuil et
application à la biologie
|
Ph.D. Thesis, Université
Grenoble 1 - Joseph Fourier, 2008
link,
bibtex
|
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[1]
|
Modèle de
diffusion de la confiance pour les réseaux
ad hoc
|
Master Thesis,
École normale supérieure de
Lyon, 2005
link,
bibtex
|
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RESEARCH REPORTS
|
|
[4]
|
Final report for the project ECOS Sud C16E01
|
|
|
[3]
|
Towards a
theory of modelling with Boolean automata
networks - I. Theorisation and
observations
|
M. Noual &
S. Sené
arXiv:1111.2077, 2011
link
|
|
|
[2]
|
Final report for the project ACI Knowledge authentication
ambient (KAA)
|
S. Galice,
V. Legrand, F. Le Mouël,
M. Minier, S. Ubéda,
M. Morvan, S. Sené,
L. Guihery, A. Rabagny,
J. Moret-Bailly,
J.-P. Neuville, J. Pousin
link
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[1]
|
Le modèle
des piles de sable sur une grille
bi-dimensionnelle
|
Master research report,
Université Paris 7 - Denis Diderot,
2004
link
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|
|
POSTERS
|
|
[3]
|
Influence
des conditions de bords dans les réseaux
biologiques
|
|
|
[2]
|
Instabilités
structurelles et analyses
temporo-spatiales en biologie
|
|
|
[1]
|
Trudi: a
trust diffusion protocol for ad hoc
networks
|
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